Browse of TCMCG023C17828 protein

CDS

Accession Number	TCMCG023C17828
gbkey	CDS
Protein Id	PIN09400.1
Location	complement(join(24049..24171,24982..25111,25200..25265,25529..25657,25853..25947,26588..26656,27132..27243,27583..27701,27776..27856,29261..29332,29411..29617,30766..30843,30951..31073,31794..31884,31976..32031,32166..32273,32419..32547,33007..33061,33155..33285,33448..34352,35296..35410))
Organism	Handroanthus impetiginosus
locus_tag	CDL12_18014

Protein

Length	997aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA324125, BioSample:SAMN05195323
db_source	NKXS01003545.1
Definition	Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain) [Handroanthus impetiginosus]
Locus_tag	CDL12_18014

EGGNOG-MAPPER Annotation

COG_category	KL
Description	SNF2 family N-terminal domain
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K20093        [VIEW IN KEGG]
EC	3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	-
GOs	GO:0000018        [VIEW IN EMBL-EBI] GO:0000019        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009893        [VIEW IN EMBL-EBI] GO:0010035        [VIEW IN EMBL-EBI] GO:0010038        [VIEW IN EMBL-EBI] GO:0010604        [VIEW IN EMBL-EBI] GO:0019219        [VIEW IN EMBL-EBI] GO:0019222        [VIEW IN EMBL-EBI] GO:0031323        [VIEW IN EMBL-EBI] GO:0031325        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0045911        [VIEW IN EMBL-EBI] GO:0045935        [VIEW IN EMBL-EBI] GO:0045951        [VIEW IN EMBL-EBI] GO:0046686        [VIEW IN EMBL-EBI] GO:0048518        [VIEW IN EMBL-EBI] GO:0048522        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051052        [VIEW IN EMBL-EBI] GO:0051054        [VIEW IN EMBL-EBI] GO:0051171        [VIEW IN EMBL-EBI] GO:0051173        [VIEW IN EMBL-EBI] GO:0060255        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0080090        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAAACTTGAGCACGTTGAGCTAGGGAGTGGTAAAATATCTGGAAACGAAGATAATGCTGCCAAGAAAAAATCTTCATTAACTTGTGTTGCTGTTTTTGATTCCAATGTCCCAGGAGAAGAAAGGAAAATGAAAGTGAGAATTGAAGGCAGGCGTCGTCTCTGCAGAATTTCCAAGAATAATGACGGTGATGCTGGGGAAGGGAAGGACTTTATAAGAGATGAAGGAGCGAATTTTGATGGCATTTCAGATTTTGATTCGCCTCTTCAGGTAAATAAAACATGTGAGACTACAGGAAATGAGATCAGGGATATACTGAACGATTTGAGTTCAAGGCTTGAGATTCTTTCGATTGAGAAGAAAAGGGTTCCTAAGAAGGTTGATGTCATGGAGGATTTACAGGAGTCAGTGAGAAGTAAGTTATCTAATGTGTCCCTAAAAGAGGGATTCGCTGGACATGAGACTGCTGCTTCATATCCGCTTTCATCTGATTCCCTAGTAGACACAATTGGGTCAAAAGTTGGAGGTGCTGTTAAGAAGGAACACCAAAAGGAAAAAAGTTACATTGCTATCAGTAAGGATGATAAGAAAGTTGATAAGGCCAACAGAACCATGTCTAAATGCAATGGTCTTAATAAAAATGAGCTTAGGAGAGCACACATAAAGTTAGGATCTGCAAAAGACTCATCGCAAGGTTACAATTACAAAAGAGAAGAGGAAAATTATGATACTAATGATTATGTGGATTTGACTGAAATACACACTGTTAAACAAGTGGATTGGGGACAAGGGAAGATTGTTGAGGTATCTGATGAAGAATCTGATGAGGTCACTATGTTGGATGATCATGTAGACGACTTCATTTTGAGTGGTCCAAAGTGGACGTACAGGTTACCCGGTAAAATAGCAAACATGCTGTATCCTCATCAGCGCGAAGGACTGAAGTGGCTCTGGTCTCTTCATTGTAAGGGTAAGGGTGGTATTTTGGGTGATGATATGGGTCTTGGCAAGACAATGCAGATGTGTAGCTTCATAGCTGGATTGTTCCACTCAAATTTGGTTCGCAGGGTCCTGGTTGTTGCACCAAAAACACTATTAACCCACTGGATAAATGAGCTATCAACAGTTGGACTCTCTGAGAAGACGAGAGAGTATTTTGCTACCTGCACAAAAACTCGACATTATGAGCTCCAATATGTACTTCAGGACAAAGGTGTACTTTTAACAACTTATGATATCGTGCGGAACAATGCAAAATCCTTATGTGGAGATTATCATTACAAAGATGACGGAGAAGAAGATGAGACAACATGGGATTACGTGATTCTTGATGAGGGCCATCTTATAAAAAATCCAAGTACACAAAGGGCGAAAAGTTTGCTCCAAATACCTTGTCTTCATCGTATCATTATCAGTGGCACACCACTCCAGAACAATCTTAAGGAGTTGTGGGCCTTATTTAATTTCTGCTGTCCTGAGCTACTTGGCGAGAAGAAAGAGTTTAAGGAAAAATATGAGCATTTCATCAATCGAGGAAACGAGAAAAATGCCTCTGACCGTGAAAAGCGTATTGGTTCGTCAGTTGCAAAGGAGCTGAGGGATTGCATTCAACCATATTTTTTGAGACGATTGAAAAGTGAAGTATTCCATGATGACACCACACTTTCAAAGAAGAATGAGATTATTGTATGGCTAAGGTTAACTCGATGTCAGCGTCAACTTTATGAAGCTTTCCTAAAGAGCGAGATTGTCATCTCAGCTTTTGATGGTTCCCCTCTTGCTGCACTTACGATCTTGAAAAAAATATGTGATCATCCCCTTCTATTGACAAAAAGAGCCGCCGAAGATGTTCTGGAAGGGATGGATTCAATGGTGGGCCAGGAGGATCATCGTGTTGCTGAAAAATTGGCAATGCACATAGCAGATGTTGCTGATAAATATGACATTGTTGAGAATCATGATATCTCTTGCAAAATATCATTTATATTATCTCTACTGGGCAATTTAGTTCCGAAGGGGCACAACGTGCTTATATTTTCACAAACTCGGAAGATGCTTAATCTAATTCAGGAATCACTGACATCCAATCACTACAAGTACATGCGGATAGATGGTACTACCAAAGCCAGTGATAGAGCTAAAATCGTCAAGGATTTTCAAGAGGGTCGTGGCGCCCCAATTTTTCTCTTAACCTCCCAAGTTGGTGGACTGGGCCTTACACTCACTAATGCTGATCGTGTGATCGTGGTTGATCCAGCATGGAATCCCAGCACTGACAATCAGAGTGTGGATCGTGCATACCGGATTGGGCAAAAGAAGGATGTCATTGTGTACAGATTAATGACGTGTGGCACTGTGGAAGAAAAGATCTATAGAAAGCAGGTATTCAAAGGAGGGTTATTCAGAAGTGCAACTGAACACAAAGAACAAATTCGTTATTTCAGCCAACAGGATCTGCGGGATCTTTTCACTTTGCCGAAACAAGGATTTGATATTTCTCCTACACAACAACAATTGCTTGAAGAGCATGATCATCAGCATACAATGGAAGAGTCTCTTAGAGCCCATGTAGAGTTCCTTGAAACTCTCAACATAGCTGGAGTTAGCCAGCATAGTTTGCTGTTTTCCAAGGCAGCACCTATACAGACAATTGAGATAGAGGAGGATGTCAGAAGGTCAAGAGGAAGTACATTCATGGGGAATGCATCTACACGGTCATCAGTTGAACATAACGTTGACGGAGCACAGTATGCTTTTAACCCCAAGGATGTAAAGAAATTCCAGAAGAATTCAAGTCCTGATGTTAGGGAACCATCAGAAGATGAAATCAGAGAGAGAATTAATCGTTTATCTCAGATCTTTGCTAATAAGGTTGCAGTCTCTAGACTGCCTGATAAGGGAGAGAAAATACATAAGCAAATAGCTGCATTGAGACTTCAGCTTGATCAGGTGCGAATGGCTAAAGGAAACAAGGATAACGTAATTGAGCTGTAG

Protein:   MKLEHVELGSGKISGNEDNAAKKKSSLTCVAVFDSNVPGEERKMKVRIEGRRRLCRISKNNDGDAGEGKDFIRDEGANFDGISDFDSPLQVNKTCETTGNEIRDILNDLSSRLEILSIEKKRVPKKVDVMEDLQESVRSKLSNVSLKEGFAGHETAASYPLSSDSLVDTIGSKVGGAVKKEHQKEKSYIAISKDDKKVDKANRTMSKCNGLNKNELRRAHIKLGSAKDSSQGYNYKREEENYDTNDYVDLTEIHTVKQVDWGQGKIVEVSDEESDEVTMLDDHVDDFILSGPKWTYRLPGKIANMLYPHQREGLKWLWSLHCKGKGGILGDDMGLGKTMQMCSFIAGLFHSNLVRRVLVVAPKTLLTHWINELSTVGLSEKTREYFATCTKTRHYELQYVLQDKGVLLTTYDIVRNNAKSLCGDYHYKDDGEEDETTWDYVILDEGHLIKNPSTQRAKSLLQIPCLHRIIISGTPLQNNLKELWALFNFCCPELLGEKKEFKEKYEHFINRGNEKNASDREKRIGSSVAKELRDCIQPYFLRRLKSEVFHDDTTLSKKNEIIVWLRLTRCQRQLYEAFLKSEIVISAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDSMVGQEDHRVAEKLAMHIADVADKYDIVENHDISCKISFILSLLGNLVPKGHNVLIFSQTRKMLNLIQESLTSNHYKYMRIDGTTKASDRAKIVKDFQEGRGAPIFLLTSQVGGLGLTLTNADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLMTCGTVEEKIYRKQVFKGGLFRSATEHKEQIRYFSQQDLRDLFTLPKQGFDISPTQQQLLEEHDHQHTMEESLRAHVEFLETLNIAGVSQHSLLFSKAAPIQTIEIEEDVRRSRGSTFMGNASTRSSVEHNVDGAQYAFNPKDVKKFQKNSSPDVREPSEDEIRERINRLSQIFANKVAVSRLPDKGEKIHKQIAALRLQLDQVRMAKGNKDNVIEL